Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917318.1_cds_XP_016466930.1_59733
CDS Infomation

[gene=LOC107789605] [db_xref=GeneID:107789605] [protein=threonine dehydratase biosynthetic, chloroplastic-like isoform X2] [protein_id=XP_016466930.1] [location=complement(join(2776..2916,3021..3155,3482..3554,3747..3820,3908..4156,5624..6100,6216..6395,7210..7641))] [gbkey=CDS]
Sequence

ATGGATGTTCTCCGTTTTAATTCCCTAAAGTCACGCAATTTCCACTTCGGTCCCAAATCC
ACGTCGGGCACAGCCTTTATTACGGTTACTTCCGATGCCATGAAACCCGCCGCCACGAGG
AAAACAAAAAGGACGGGGATCAAACCGCCGGCGGCACTTATAGCGGAGAAGCCGTTGGAG
ATTTCACTGTTACAGGCATCCCCGTCTGTTTCAGATATAGTGCTACCAGTAGTACACCCG
AGTTCGTTACAATGCGAGCCAGGGTATTTGATACCGAATTATCCACGTGGTAATATCGGC
TACAAGTACATGAAAGAAATATTGACATCAAAAGTGTATGAGGTAGCCGATGAAACGCCT
CTGCAGTTTGCACCTAAGCTCTCTGAGCGGTTAGGGGTAAATTTATGGCTCAAAAGAGAG
GATCTTCAGCCGGTCTTCTCATTCAAGGTCAGAGGATCTTACCATATGATGGCAAAGCTC
CCTAGAGAGCTGTTAGAAAAGGGAGTTATATGCTCATCAGCTGGAAATCATGCACAAGGT
GTTGCATTAGCTGCCCAGAGACTTGGTTGCAATGCTGTGATTGTGATGCCAGTTACTACA
CCAGAAATTAAATGGAAATCCGTTGAGAGATTGGGTGCTACTGTTATTTGCAAGGGGGAC
ACATATGATGAAGCTCAAGCATATGCGAAAGCTCAGGCCAAAGCAGAAGGCCGCACATTC
GTCCCTCCTTTTGATCACCCAGATATTATAATAGGACAAGGTACAGTTGGAATGGAGATT
AGTCGCCAATTCAAGGATGACATACACGCAGTATTTGTACCTGTTGGTGGAGGGGGTCTT
ATAGCTGGAATTGCGGCATATTTGAAAAAAGTTTCCCCTGATATAAAGATTATCGGTGTT
GAGCCATTCGATTCAAATGCAATGGCATTGTCGTTGCACCATGGTCGAAGAATAATGCTG
GAACATGTTGGAGGTTTTGCAGATGCTGTAGCTATTAAAGTGATGGGAGAAGAAACTTTC
CGTCTCTGCAGGGAATTATTAGATGGGGTGGTCCTAGTTGGTCGTGATGCTATATGTGCA
TCGATAAAGGACATGTTTGAAGAGAAACGAAGCATATTGGAGCCTGCAGGTGCACTTGCT
CTTGCTGGAGCAGAAGCGTATTGTAAGTACTATGGCCTGAAGGGTGAAAACATAGTAGCA
ATAACTAGTGGAGCCAACATGAATTTTGACAGACTTAGATTGGTAACTGAACTCGCGGAT
GTTGGTAGGCAGCGGGAAGCTGTTCTCGTTACTTATATGCCCGAAGAGCCAGGGAGCTTC
AGAAAGTTCTATAAAATGGTGGGAAGGATGAATCTTACTGAATTGAAGTACAGATATAAT
TCTGAGAAAGAAAAAGCTAGAGTACTTTACAGGATGGAATCATCACAACTGCATACCATT
AATTTTACAGATAATGAATTGGTCAAAGATCATCTAAGGCATCTGATGGGTGGCAGATCA
AATGTTCACGATGAGCTTCTCTGTCGATTCATTTTTCCCGAGAGGCCTGGTGCTTTGATG
AAGTTTTTAGATGCTTTTAGCCCGCGTTGGAATATTAGTTTGTTCCATTACCGTGCACAG
GGAGAAACTGGTGCAAATGTGTTAGTCGGCATCCAAGTTCCACAGGGTGAGGTCGGTGAG
TTCAAGGCACGAGCTGACACTCTTGGTTATGAATATGTAGTGGAGACTCTCAATGAGGCT
TTCCAGATACTGATGCATTGA

Peptide Sequence

PEP ID

XP_016466930.1
PEP Infomation

PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MDVLRFNSLKSRNFHFGPKSTSGTAFITVTSDAMKPAATRKTKRTGIKPPAALIAEKPLE
ISLLQASPSVSDIVLPVVHPSSLQCEPGYLIPNYPRGNIGYKYMKEILTSKVYEVADETP
LQFAPKLSERLGVNLWLKREDLQPVFSFKVRGSYHMMAKLPRELLEKGVICSSAGNHAQG
VALAAQRLGCNAVIVMPVTTPEIKWKSVERLGATVICKGDTYDEAQAYAKAQAKAEGRTF
VPPFDHPDIIIGQGTVGMEISRQFKDDIHAVFVPVGGGGLIAGIAAYLKKVSPDIKIIGV
EPFDSNAMALSLHHGRRIMLEHVGGFADAVAIKVMGEETFRLCRELLDGVVLVGRDAICA
SIKDMFEEKRSILEPAGALALAGAEAYCKYYGLKGENIVAITSGANMNFDRLRLVTELAD
VGRQREAVLVTYMPEEPGSFRKFYKMVGRMNLTELKYRYNSEKEKARVLYRMESSQLHTI
NFTDNELVKDHLRHLMGGRSNVHDELLCRFIFPERPGALMKFLDAFSPRWNISLFHYRAQ
GETGANVLVGIQVPQGEVGEFKARADTLGYEYVVETLNEAFQILMH

Transcript Sequence

Gene sequence data has not been registered.